In media reports on intelligent design, one often hears the following sound bite: “Life is too complicated to have arisen by natural forces, so it must have been designed.” This sound bite captures many people’s intuitions about intelligent design, but is too simplistic for scientific purposes. Behe has shown us how to interpret this claim, substituting the rigorously defined phrase irreducibly complex for the vague and undefined phrase too complicated, and he has shown us how to reason our way properly from the inadequacy of undirected natural forces to design.(8)
Media reports claim intelligent design is a "faith-based" alternative to evolution based entirely on religion rather than scientific evidence, that it’s just creationism repackaged by religious fundamentalists in order to circumvent a 1987 Supreme Court prohibition against teaching creationism in the public schools.
In reality, the modern theory of intelligent design was developed by a group of scientists who were trying to account for the origin of the digital information encoded along the spine of the DNA molecule. The information-bearing properties of DNA provided them strong evidence of a prior but unspecified designing intelligence.
In 1953 when Watson and Crick elucidated the structure of the DNA molecule, they made a startling discovery. The structure of DNA allows it to store information in the form of a four-character digital code. Strings of precisely sequenced chemicals called nucleotide bases store and transmit the assembly instructions, or information, for building the crucial protein molecules and machines the cell needs to survive. As famed evolutionist Richard Dawkins has acknowledged, “the machine code of the genes is uncannily computer-like.” Bill Gates has noted, “DNA is like a computer program, but far, far more advanced than any software we've ever created.”(9)
After the early 1960s, further discoveries made it clear that the digital information in DNA and RNA is only part of a complex information processing system, an advanced form of nanotechnology that both mirrors and exceeds our own in its complexity, design logic and information storage density. Today, the questions of where this digital information came from lies at the heart of origin-of-life research.
Clearly, the informational features of the cell at least appear designed. To date no theory of undirected chemical evolution has come close to explaining the origin of the digital information needed to build the first living cell. There is simply too much information in the cell to be explained by chance alone. And the information in DNA has also been shown to defy explanation by reference to the laws of chemistry.
Yet, the scientists arguing for intelligent design do not do so merely because natural processes, chance, or laws have failed to explain the origin of the information. They also argue for design because we know from experience that systems possessing these features invariably arise from intelligent causes. DNA functions like a software program. Software obviously comes from programmers. Information always arises from an intelligent source. So the discovery of information in the DNA molecule provides strong grounds for inferring that intelligence played a role in the origin of DNA, even if we weren't there to observe the system coming into existence.
Thus, contrary to media reports, the theory of intelligent design is not based upon ignorance or religion but instead upon recent scientific discoveries and upon standard methods of scientific reasoning in which our uniform experience of cause and effect guides our inferences about what happened in the past. Of course, many will still dismiss intelligent design as nothing but warmed over creationism or as a “religion masquerading as science.” But intelligent design, unlike creationism, is not necessarily based upon the Bible. Design is an inference from biological data, not a deduction from religious authority.
According to neo-Darwinism, wholly undirected processes such as natural selection and random mutations are fully capable of producing the intricate designed-like structures in living systems. In their view, natural selection can mimic the powers of a designing intelligence without itself being directed by an intelligent designer. In contrast, the theory of intelligent design holds that there are tell-tale features of living systems and the universe that are best explained by an intelligent cause. As Behe pointed out, and many biologists agree, this appearance of design cannot be merely an illusion. Natural selection could not have produced this appearance in a neo-Darwinian fashion, one tiny incremental mutation at a time.
As neo-Darwinists explain it, natural selection preserves or “selects” functional advantages. If a random mutation helps an organism survive, it can be preserved and passed on to the next generation. Yet these irreducibly complex mechanisms, as Behe detailed at length, have no function until after all of its parts have been assembled. Thus, hypothetically, natural selection can supposedly "select" or preserve the machine once it has arisen as a functioning whole, but it can do nothing to help build it in the first place. This leaves the origin of molecular machines unexplained by the mechanism of natural selection.
Based upon our uniform and repeated experience, we know of only one type of cause that produces irreducibly complex systems: intelligence. Whenever we encounter irreducibly complex systems, such as an integrated circuit or an internal combustion engine, we know invariably a designing engineer played a role. Yet even the simplest cell is much more complex than anything created by man. Intelligent design best explains the origin of molecular machines within cells. Molecular machines appear designed because they were designed.